gene ontology (Biotechnology Information)

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Biotechnology Information gene ontology
Gene Ontology, supplied by Biotechnology Information, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/gene+ontology/gene+ontology/pm42121777-126-0-18
Average 86 stars, based on 1 article reviews

gene ontology - by Bioz Stars, 2026-10

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Article Title: Stage-Specific Transcriptomic Analysis Reveals Molecular Basis of Ovarian Sterility in Triploid Turbot ( Scophthalmus maximus ).
Article Snippet: GO—Gene Ontology; KEGG—Kyoto Encyclopedia of Gene and Genome; EggNOG—Evolutionary Genealogy of Genes: Non-supervised Orthologous Groups; NR—National Center for Biotechnology Information (NCBI) Refseq. https://doi.org/10.3390/ani16091357

Article Title: New genomic resources inform transcriptomic responses to heavy metal toxins in the common Eastern bumble bee Bombus impatiens.
Article Snippet: Abbreviations BUSCO Benchmarking Universal Single-Copy Orthologs GO Gene Ontology NCBI National Center for Biotechnology Information PacBio Pacific Biosystems SMRT Single Molecule Real Time Supplementary Information The online version contains supplementary material available at h t t p s : / / d o i . o r g / 1 0 .

Article Title: Complete genome analysis of pathogenic Metschnikowia bicuspidata strain MQ2101 isolated from diseased ridgetail white prawn, Exopalaemon carinicauda.
Article Snippet: The genes were annotated by alignment with genes deposited in numerous databases, including the Gene Ontology (GO, parameter was default), Clusters of Orthologous Groups of Proteins (COG, evalue ≤ 1e−5), and Protein Families (Pfam, parameter was default) databases from the National Center for Biotechnology Information (NCBI), nonredundant protein (Nr, evalue ≤ 1e−5) database, UniProt/ Swiss-Prot (evalue ≤ 1e−5) and Kyoto Encyclopedia of Genes and Genomes (KEGG, evalue ≤ 1e−5).

Article Title: GFAP: ultrafast and accurate gene functional annotation software for plants.
Article Snippet: Popular GFA tools (Supplemental Table S1) that use sequences as input are divided into 2 categories: (i) reference-based tools where users select a closely-related annotated reference species to annotate the newly sequenced genome and (ii) tools that annotate using a complete database of GFA information like Gene Ontology (GO), Kyoto Encyclopedia of Genes and Genomes (KEGG), Protein family (Pfam), and National Center for Biotechnology Information (NCBI) nr (homologybased annotation) or a machine learning model trained by 1 or more databases (de novo annotation).

Article Title: Biocontrol potential of Bacillus subtilis CTXW 7-6-2 against kiwifruit soft rot pathogens revealed by whole-genome sequencing and biochemical characterisation
Article Snippet: Gene functions were annotated using the National Center for Biotechnology Information (NCBI) non-redundant protein, Swiss-Prot, Kyoto Encyclopedia of Genes and Genomes, Clusters of Orthologous Groups of proteins, Gene Ontology, Pathogen–Host Interactions, Carbohydrate-Active enZYmes, and Rapid Annotations using Subsystem Technology databases, revealing non-ribosomal pathways associated with antifungal mechanisms, biofilm formation, chemotactic motility, VOC 3-hydroxy-2-butanone, cell wall-associated enzymes, and synthesis of various secondary metabolites. antiSMASH analysis predicted that CTXW 7-6-2 can produce the active substances bacillaene, bacillibactin, subtilosin A, bacilysin, and luminmide and has four gene clusters of unknown function.

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Article Title: Transcriptomic and metabolomic analysis reveals key genes and metabolites in common vetch (Vicia sativa L.) response to drought stress.
Article Snippet: .. Functional annotation of differentially expressed genes (DEGs) was conducted using the Gene Ontology (GO, http://www.geneontology.org/), Kyoto Encyclopedia of Genes and Genomes (KEGG, http://www.genome.jp/kegg/), and National Center for Biotechnology Information (NCBI, https://www.ncbi.nlm.nih.gov/) databases. ..

Article Title: Transcriptomic and metabolomic analysis reveals key genes and metabolites in common vetch ( Vicia sativa L.) response to drought stress
Article Snippet: .. Functional annotation of differentially expressed genes (DEGs) was conducted using the Gene Ontology (GO, http://www.geneontology.org/ ), Kyoto Encyclopedia of Genes and Genomes (KEGG, http://www.genome.jp/kegg/ ), and National Center for Biotechnology Information (NCBI, https://www.ncbi.nlm.nih.gov/ ) databases. ..

Article Title: A PacBio single molecule real-time sequencing-based full-length transcriptome atlas of tree tomato ( Solanum betaceum Cav.) and mining of simple sequence repeat markers
Article Snippet: .. Gene functional annotation was performed using the National Center for Biotechnology Information (NCBI) non-redundant protein (Nr, E-value ≤1 e-5), NCBI non-redundant nucleotide (Nt, E-value ≤1 e-5), gene ontology (GO, E-value ≤1e-10), Kyoto encyclopedia of genes and genomes (KEGG, E-value ≤1e-3), eukaryotic orthologous groups (KOG, E-value ≤1e-3), Swissprot protein (E-value ≤1e-5 -5 ), and protein family (Pfam, E-value ≤0.01) databases. ..

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